Advanced   Register
XTBG OpenIR  > 2012年后新成立研究组  > 期刊论文

title: Complete chloroplast genome sequence of the avocado: gene organization, comparative analysis, and phylogenetic relationships with other Lauraceae
author: Song, Yu;  Yao, Xin;  Tan, Yunhong;  Gan, Yi;  Corlett, Richard T.
Issued Date: 2016
Abstract: The complete chloroplast sequence of the avocado (Persea americana Mill.), a popular tropical fruit tree, was determined in this study. The plastome consists of 152 723 bp, with a typical circular structure including inverted repeats (IRs) 40 104 bp in length separated by a large single-copy region (LSC) and a small single-copy region (SSC) of 93 795 bp and 18 824 bp, respectively. Potential mutation sites, including 61 repeats and 679 simple sequence repeats, were accurately located in the avocado plastome. Compared with the plastomes of five other related Lauraceae, 25 highly variable regions and six micro-inversions were identified, and the contraction event of the IR regions was observed. However, the plastomes of Lauraceae are extremely evolutionarily conservative, with only 0.32% sequence divergence, which is surprisingly low for angiosperms. Further phylogenetic analyses were conducted using eight complete plastomes of Lauraceae and seven barcoding sequences from 23 Persea species. These data support a close relationship between the genera Persea and Machilus and suggest that Persea is polyphyletic.
Source: CANADIAN JOURNAL OF FOREST RESEARCH
Appears in Collections:2012年后新成立研究组_期刊论文

Files in This Item:

File SizeFormat
Complete chloroplast genome sequence of the avocado_ gene organization, comparative analysis, and phylogenetic relationships with other Lauraceae.pdf2562KbAdobe PDFView  Download


全文许可: Creative Commons 署名-非商业性使用-相同方式共享 3.0

Recommended Citation:
Song, Yu,Yao, Xin,Tan, Yunhong,et al. Complete Chloroplast Genome Sequence Of The Avocado: Gene Organization, Comparative Analysis, And Phylogenetic Relationships With Other Lauraceae[J]. Canadian Journal Of Forest Research,2016,40(11):1293-1301.

SCI Citaion Data:
Service
 Recommend this item
 Sava as my favorate item
 Show this item's statistics
 Export Endnote File
Google Scholar
 Similar articles in Google Scholar
 [Song, Yu]'s Articles
 [Yao, Xin]'s Articles
 [Tan, Yunhong]'s Articles
CSDL cross search
 Similar articles in CSDL Cross Search
 [Song, Yu]‘s Articles
 [Yao, Xin]‘s Articles
 [Tan, Yunhong]‘s Articles
Scirus search
 Similar articles in Scirus
Related Copyright Policies
Null
Social Bookmarking
  Add to CiteULike  Add to Connotea  Add to Del.icio.us  Add to Digg  Add to Reddit 
所有评论 (0)
暂无评论
 
评注功能仅针对注册用户开放,请您登录
您对该条目有什么异议,请填写以下表单,管理员会尽快联系您。
内 容:
Email:  *
单位:
验证码:   刷新
您在IR的使用过程中有什么好的想法或者建议可以反馈给我们。
标 题:
 *
内 容:
Email:  *
验证码:   刷新

Items in IR are protected by copyright, with all rights reserved, unless otherwise indicated.

 

 

Valid XHTML 1.0!
Powered by CSpace