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Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.)
Wang, Peipei; Li, Jing; Gao, Xiaoyang; Zhang, Di; Li, Anlin; Liu, Changning; Liu, CN (reprint author), Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Key Lab Trop Plant Resource & Sustainable Use, Kunming 650223, Yunnan, Peoples R China.
2018
Source PublicationINTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
ISSN1422-0067
Volume19Issue:6Pages:-
AbstractPhysic nut (Jatropha curcas L.) is a species of flowering plant with great potential for biofuel production and as an emerging model organism for functional genomic analysis, particularly in the Euphorbiaceae family. DNA binding with one finger (Dof) transcription factors play critical roles in numerous biological processes in plants. Nevertheless, the knowledge about members, and the evolutionary and functional characteristics of the Dof gene family in physic nut is insufficient. Therefore, we performed a genome-wide screening and characterization of the Dof gene family within the physic nut draft genome. In total, 24 JcDof genes (encoding 33 JcDof proteins) were identified. All the JcDof genes were divided into three major groups based on phylogenetic inference, which was further validated by the subsequent gene structure and motif analysis. Genome comparison revealed that segmental duplication may have played crucial roles in the expansion of the JcDof gene family, and gene expansion was mainly subjected to positive selection. The expression profile demonstrated the broad involvement of JcDof genes in response to various abiotic stresses, hormonal treatments and functional divergence. This study provides valuable information for better understanding the evolution of JcDof genes, and lays a foundation for future functional exploration of JcDof genes.
Department其他
KeywordJatropha Curcas Dof Gene Family Transcription Factor Phylogenetic Analysis Gene Expression Analysis
Subject AreaBiochemistry & Molecular Biology ; Chemistry
Language英语
Document Type期刊论文
Identifierhttp://ir.xtbg.org.cn/handle/353005/11009
Collection2012年后新成立研究组
Corresponding AuthorLiu, CN (reprint author), Chinese Acad Sci, Xishuangbanna Trop Bot Garden, Key Lab Trop Plant Resource & Sustainable Use, Kunming 650223, Yunnan, Peoples R China.
Recommended Citation
GB/T 7714
Wang, Peipei,Li, Jing,Gao, Xiaoyang,et al. Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.)[J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES,2018,19(6):-.
APA Wang, Peipei.,Li, Jing.,Gao, Xiaoyang.,Zhang, Di.,Li, Anlin.,...&Liu, CN .(2018).Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.).INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES,19(6),-.
MLA Wang, Peipei,et al."Genome-Wide Screening and Characterization of the Dof Gene Family in Physic Nut (Jatropha curcas L.)".INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 19.6(2018):-.
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